Information for 19-GAACTGTA (Motif 13)


Reverse Opposite:

p-value:1e-144
log p-value:-3.327e+02
Information Content per bp:1.612
Number of Target Sequences with motif16356.0
Percentage of Target Sequences with motif47.38%
Number of Background Sequences with motif13705.6
Percentage of Background Sequences with motif40.55%
Average Position of motif in Targets294.7 +/- 167.2bp
Average Position of motif in Background295.3 +/- 180.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GAACTGTA-
NHAACBGYYV

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GAACTGTA-
-AACCGANA

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAACTGTA-
CCAACTGCCA

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAACTGTA-
CCAACTGCCA

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAACTGTA
--GCTGTG

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAACTGTA---
CGACCAACTGCCGTG

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAACTGTA----
CGACCAACTGCCATGC

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACTGTA-----
AAAATTGTTATGAA

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAACTGTA----
CNGACACCTGTTCNNN

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACTGTA-----
ATGGAAACCGTTATTTT