Information for 23-ACAGAGCTCT (Motif 20)


Reverse Opposite:

p-value:1e-96
log p-value:-2.223e+02
Information Content per bp:1.644
Number of Target Sequences with motif11986.0
Percentage of Target Sequences with motif34.72%
Number of Background Sequences with motif9972.7
Percentage of Background Sequences with motif29.51%
Average Position of motif in Targets295.9 +/- 167.0bp
Average Position of motif in Background292.7 +/- 176.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACAGAGCTCT----
CGAACAGTGCTCACTAT

MA0512.1_Rxra/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACAGAGCTCT--
-CAAAGGTCAGA

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAGCTCT-----
NNNCTGATATCTCNNNN

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACAGAGCTCT
-CGGAGC---

MA0442.1_SOX10/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACAGAGCTCT
ACAAAG----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACAGAGCTCT
----NGCTN-

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGCTCT
CACAGN-----

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACAGAGCTCT---
---AASCACTCAA

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGCTCT
VRRACAAWGG---

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACAGAGCTCT--
--ACAGCTGTTV