Information for 18-TCTAGCCACCCA (Motif 22)


Reverse Opposite:

p-value:1e-75
log p-value:-1.742e+02
Information Content per bp:1.565
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets311.1 +/- 148.5bp
Average Position of motif in Background272.6 +/- 180.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTAGCCACCCA----
ANNTNCCCACCCANNAC

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTAGCCACCCA
ACTAGCCAATCA

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TCTAGCCACCCA----
TGTGACCCTTAGCAACCGATTAA

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTAGCCACCCA--
--GGACCACCCACG

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCTAGCCACCCA
TACCATAGCAACGGT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTAGCCACCCA
CCGCATAGCAACGGA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCTAGCCACCCA
--AAACCACANN

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCTAGCCACCCA----
-CAAACCACAAACCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCTAGCCACCCA
---ATCCAC---

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCTAGCCACCCA
SCCTAGCAACAG-