Information for 23-GTGAGTGTTACA (Motif 25)


Reverse Opposite:

p-value:1e-41
log p-value:-9.668e+01
Information Content per bp:1.653
Number of Target Sequences with motif244.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif86.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets288.1 +/- 140.9bp
Average Position of motif in Background298.2 +/- 202.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGAGTGTTACA
--AGGTGTGAAM

MA0087.1_Sox5/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTGAGTGTTACA
---ATTGTTA--

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGAGTGTTACA
TTAAGTGCTT--

MA0111.1_Spz1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGAGTGTTACA--
---AGGGTAACAGC

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGAGTGTTACA-
---NATGTTGCAA

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTGAGTGTTACA
---ATTGTT---

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGAGTGTTACA
TTGAGTGSTT--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGTGTTACA
CTTGAGTGGCT--

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGTGTTACA
CTYRAGTGSY---

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGAGTGTTACA------
-TGATTGTTAACAGTTGG