Information for 1-ATCGAATGGAAT (Motif 1)


Reverse Opposite:

p-value:1e-25
log p-value:-5.919e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.8 +/- 66.1bp
Average Position of motif in Background177.2 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATCGAATGGAAT--
----NCTGGAATGC

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATCGAATGGAAT----
-TTGAATGAAATTCGA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ATCGAATGGAAT--
----AATGGAAAAT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATCGAATGGAAT--
----CCWGGAATGY

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATCGAATGGAAT
NNNTATTGAATTGNNN

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATCGAATGGAAT-
TATTATGGGATGGATAA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATCGAATGGAAT---
---AGATGCAATCCC

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATCGAATGGAAT--
ACTATGAATGAATGAT

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------ATCGAATGGAAT
NTNATGCAAYMNNHTGMAAY

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ATCGAATGGAAT-
------TGGAAAA