Information for 5-CGGTTTCTTTTG (Motif 6)


Reverse Opposite:

p-value:1e-22
log p-value:-5.274e+01
Information Content per bp:1.948
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.4 +/- 74.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGTTTCTTTTG--
CAGTTTCGNTTCTN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGTTTCTTTTG--
TCAGTTTCATTTTCC

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTTCTTTTG--
NTGGTTTCGGTTNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGTTTCTTTTG
TGGTTTCAGT--

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTTCTTTTG--
TNAGTTTCGATTTTN

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGTTTCTTTTG---
NNTGTTTATTTTGGCA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGTTTCTTTTG-
-RSTTTCRSTTTC

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGTTTCTTTTG-
TNTGGTTTCGATACN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGTTTCTTTTG
TGTCGGTT-------

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGTTTCTTTTG-----
NNCTTTGTTTTGNTNNN