Information for 8-AACGGGATAA (Motif 11)


Reverse Opposite:

p-value:1e-15
log p-value:-3.597e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets216.1 +/- 82.2bp
Average Position of motif in Background69.8 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACGGGATAA-----
TTAAGGGGATTAACTAC

PH0025.1_Dmbx1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACGGGATAA-----
TGAACCGGATTAATGAA

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACGGGATAA---
AAAAACGGATTATTG

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACGGGATAA------
TATAGAGATAAGAATTG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACGGGATAA--
--NBWGATAAGR

MA0467.1_Crx/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACGGGATAA-
AAGAGGATTAG

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AACGGGATAA---
---NAGATAAGNN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACGGGATAA
--NGGGATTA

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACGGGATAA--
TTGCCCGGATTAGG

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACGGGATAA-----
TTAGAGGGATTAACAAT