Information for 21-CGGGATGGGTGT (Motif 27)


Reverse Opposite:

p-value:1e-3
log p-value:-8.356e+00
Information Content per bp:1.982
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets182.1 +/- 95.9bp
Average Position of motif in Background261.5 +/- 116.2bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)5.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0493.1_Klf1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CGGGATGGGTGT----
-----TGGGTGTGGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGGGATGGGTGT----
----NTGGGTGTGGCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CGGGATGGGTGT---
-----TGGGTGTGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGGATGGGTGT
-GGGGGGGG---

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGGATGGGTGT
TATTATGGGATGGATAA

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGGATGGGTGT--
GTATTGGGTGGGTAATT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGGGATGGGTGT---
-----DGGGYGKGGC

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGGGATGGGTGT---
-----TGGGTGGGGC

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGGGATGGGTGT-
NATNGGGNGGGGANAN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGATGGGTGT
--GGAGGGGGAA