| p-value: | 1e-1 |
| log p-value: | -4.296e+00 |
| Information Content per bp: | 1.696 |
| Number of Target Sequences with motif | 11.0 |
| Percentage of Target Sequences with motif | 0.64% |
| Number of Background Sequences with motif | 130.3 |
| Percentage of Background Sequences with motif | 0.29% |
| Average Position of motif in Targets | 190.5 +/- 98.9bp |
| Average Position of motif in Background | 199.1 +/- 143.3bp |
| Strand Bias (log2 ratio + to - strand density) | -1.6 |
| Multiplicity (# of sites on avg that occur together) | 4.73 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0134.1_Pbx1/Jaspar
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GATGGATGGATG-
NNNNNATTGATGNGTGN |
|
|
|
PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GATGGATGGATG--
ACTATGAATGAATGAT |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 3 |
| Score: | 0.68
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GATGGATGGATG--
--ATGATKGATGRC |
|
|
|
MA0070.1_PBX1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GATGGATGGATG-
-TTTGATTGATGN |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GATGGATGGATG
TGATTGATGA--- |
|
|
|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GATGGATGGATG-----
NTTNTATGAATGTGNNC |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GATGGATGGATG
TGATTRATGGCY- |
|
|
|
MA0594.1_Hoxa9/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GATGGATGGATG
TGATTTATGGC-- |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GATGGATGGATG-
GTCATGCHTGRCTGS |
|
|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GATGGATGGATG---
NNANTGATTGATNTTN |
|
|
|
