Information for 12-ATTGATCACCAC (Motif 12)


Reverse Opposite:

p-value:1e-42
log p-value:-9.696e+01
Information Content per bp:1.715
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.3 +/- 44.4bp
Average Position of motif in Background58.7 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTGATCACCAC--
TAGTGATCATCATTA

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ATTGATCACCAC-
ACCGGTTGATCACCTGA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTGATCACCAC
NTATYGATCH----

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATTGATCACCAC
NNANTGATTGATNNNN--

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATTGATCACCAC
NNANTGATTGATNTTN--

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ATTGATCACCAC
ANNTCTATTGTTCNNNA-

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTGATCACCAC
TAATTGATTA----

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTGATCACCAC-
NNAATTAATGACCNNN

MA0027.1_En1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATTGATCACCAC--
---GANCACTACTT

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATTGATCACCAC
TGATTRATGGCY--