Information for 4-TGAAGATATT (Motif 16)


Reverse Opposite:

p-value:1e-31
log p-value:-7.260e+01
Information Content per bp:1.530
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets76.8 +/- 44.1bp
Average Position of motif in Background86.6 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAAGATATT-----
GACAGAGATATCAGTGT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGAAGATATT--
-AAGGATATNTN

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAAGATATT
NGAAGC----

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGATATT--
NNTNNCAATATTAG

POL005.1_DPE/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGAAGATATT
-GAAGATGTT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAAGATATT-
---AGATAASR

MA0033.1_FOXL1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAAGATATT
TATACATA--

MA0488.1_JUN/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGAAGATATT
AAGATGATGTCAT-

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGAAGATATT
ATGMATATDC-

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAAGATATT-----
AGATGCTRCTRCCHT