Information for 16-ACATCAGGCCCC (Motif 17)


Reverse Opposite:

p-value:1e-31
log p-value:-7.186e+01
Information Content per bp:1.474
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets90.3 +/- 40.0bp
Average Position of motif in Background68.7 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACATCAGGCCCC
GAGCACAGCAGGACA-

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACATCAGGCCCC
CCACACAGCAGGAGA-

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACATCAGGCCCC------
----CAGGCCNNGGCCNN

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ACATCAGGCCCC
CCNNACCATCTGGCCTN

MA0524.1_TFAP2C/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACATCAGGCCCC
CATGGCCCCAGGGCA-

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACATCAGGCCCC
CACAGCAGGGGG-

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACATCAGGCCCC
CCACACAGCAGGAGA-

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACATCAGGCCCC
--CACAGN----

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACATCAGGCCCC
ATTGCATCAT-----

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACATCAGGCCCC
ATGTCACAACAACAC--