Information for 6-GAATGCACAC (Motif 18)


Reverse Opposite:

p-value:1e-29
log p-value:-6.834e+01
Information Content per bp:1.530
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets68.5 +/- 44.3bp
Average Position of motif in Background99.5 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0479.1_FOXH1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAATGCACAC
TCCAATCCACA-

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GAATGCACAC-
SSAATCCACANN

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAATGCACAC-----
NNTTTGCACACGGCCC

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAATGCACAC------
AGCGGCACACACGCAA

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAATGCACAC------
CGAAGCACACAAAATA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAATGCACAC
CCWGGAATGY----

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAATGCACAC
NCTGGAATGC----

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAATGCACAC
CCWGGAATGY----

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAATGCACAC
GGGATTGCATNN

MA0090.1_TEAD1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAATGCACAC
CNGAGGAATGTG---