Information for 8-TGTGAGTTGA (Motif 20)


Reverse Opposite:

p-value:1e-27
log p-value:-6.321e+01
Information Content per bp:1.961
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets76.0 +/- 47.3bp
Average Position of motif in Background67.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTGAGTTGA
TGGCAGTTGN

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTGAGTTGA-
-GTGGGGTGAT

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAGTTGA---
NNNTGGCAGTTGGTNN

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGAGTTGA-
TGTGGATTNNN

MA0596.1_SREBF2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTGAGTTGA-
-ATGGGGTGAT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGAGTTGA
TGGCAGTTGG

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTGAGTTGA---
-GWAAYHTGABMC

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTGAGTTGA
---GTGTTGN

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTGAGTTGA
CNGTGATTTN-

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAGTTGA---
CACGGCAGTTGGTNN