Information for 18-GAGGATGGTCTC (Motif 21)


Reverse Opposite:

p-value:1e-27
log p-value:-6.227e+01
Information Content per bp:1.693
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif120.9
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets81.8 +/- 47.7bp
Average Position of motif in Background74.9 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0598.1_EHF/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGGATGGTCTC
CAGGAAGG----

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGATGGTCTC
CGTGGGTGGTCC-

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GAGGATGGTCTC
CTACTAGGATGTNNTN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATGGTCTC---
NNANTGGTGGTCTTNNN

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGATGGTCTC-
GGAGAAAGGTGCGA

MA0095.2_YY1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGATGGTCTC
CAAGATGGCGGC

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGGATGGTCTC
AAGGAAGTA---

MA0090.1_TEAD1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATGGTCTC
CNGAGGAATGTG--

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAGGATGGTCTC---
-----TGGTTTCAGT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATGGTCTC
GGGAGGACNG----