Information for 10-CTTGCAGATT (Motif 24)


Reverse Opposite:

p-value:1e-25
log p-value:-5.848e+01
Information Content per bp:1.965
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets80.8 +/- 47.1bp
Average Position of motif in Background97.3 +/- 46.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGATT----
CCTTGCAATTTTTNN

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGATT
ATTTGCATAT-

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGATT-
ACTTTCACTTTC

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTGCAGATT--
NNTGTGGATTSS

MA0507.1_POU2F2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGATT--
ATATGCAAATNNN

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTGCAGATT-----
CGTTGGGGATTAGCCT

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTGCAGATT---
CAATTGCAAAAATAT

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTGCAGATT---
--TGTGGATTNNN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTGCAGATT--
--TGCTGACTCA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCAGATT-
RSTTTCRSTTTC