Information for 21-CTTAGATTTACG (Motif 26)


Reverse Opposite:

p-value:1e-24
log p-value:-5.591e+01
Information Content per bp:1.530
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.9 +/- 36.9bp
Average Position of motif in Background115.3 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGATTTACG
TGCTGTGATTT---

MA0485.1_Hoxc9/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTAGATTTACG---
--NTGATTTATGGCC

MA0038.1_Gfi1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTAGATTTACG
CNGTGATTTN--

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTAGATTTACG---
---TGATTTATGGCC

PH0067.1_Hoxc12/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTAGATTTACG------
-GNNNTTTTACGACCTNA

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTAGATTTACG---
---TGATTTATGGCC

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTAGATTTACG------
-NNNATTTTACGACNNTN

MA0594.1_Hoxa9/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTAGATTTACG--
---TGATTTATGGC

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGATTTACG
TNCCTTTGATGT---

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTTAGATTTACG
ATTTCCTTTGATCTATA