Information for 22-CGGCACCCTGTG (Motif 27)


Reverse Opposite:

p-value:1e-24
log p-value:-5.591e+01
Information Content per bp:1.704
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 39.0bp
Average Position of motif in Background108.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CGGCACCCTGTG
------GCTGTG

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGCACCCTGTG---
NNTCCTGCTGTGNNN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGCACCCTGTG
--ACTTCCTGTT

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGGCACCCTGTG---
-----CCATGTGCTT

MA0147.2_Myc/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGCACCCTGTG---
-----CCATGTGCTT

MA0098.2_Ets1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCACCCTGTG--
CCCACTTCCTGTCTC

MA0116.1_Zfp423/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCACCCTGTG----
-GCACCCCTGGGTGCC

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCACCCTGTG
GGCCACACCCA---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGGCACCCTGTG
GGCCACACCCAN--

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGGCACCCTGTG----
-----GTCTGTGGTTT