Information for 19-KTCCTRGRTA (Motif 36)


Reverse Opposite:

p-value:1e-17
log p-value:-3.967e+01
Information Content per bp:1.762
Number of Target Sequences with motif1490.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif1197.4
Percentage of Background Sequences with motif3.32%
Average Position of motif in Targets79.1 +/- 43.7bp
Average Position of motif in Background77.8 +/- 44.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-KTCCTRGRTA----
TACCCTAGTTACCGA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-KTCCTRGRTA----
TTTCCTGGAAAGNNN

MA0463.1_Bcl6/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KTCCTRGRTA---
TTTCCTAGAAAGCA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----KTCCTRGRTA--
NNNATTCCTCGAAAGN

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----KTCCTRGRTA--------
ACTGACCCTTGGTTACCACAAAG

MA0137.3_STAT1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KTCCTRGRTA
TTTCCTGGAAA

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KTCCTRGRTA------
CTACTTGGATACGGAAT

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KTCCTRGRTA--
TCCCNNGGGACN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:KTCCTRGRTA---
-----AGATAASR

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KTCCTRGRTA-----
GAAAACTAGTTAACATC