Information for 23-GTTTACACTG (Motif 39)


Reverse Opposite:

p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.3 +/- 43.3bp
Average Position of motif in Background94.6 +/- 47.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0047.2_Foxa2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTTTACACTG-
TGTTTACTTAGG

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACACTG----
NSTGTTTRCWCAGBNNN

MA0148.3_FOXA1/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GTTTACACTG
TCCATGTTTACTTTG

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACACTG
TGTTTACA---

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GTTTACACTG
CNTGTTTACATA-

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACACTG
TNTGTTTACTT--

MA0031.1_FOXD1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTTACACTG
ATGTTTAC----

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTTTACACTG
NYYTGTTTACHN--

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACACTG
TGTTTACTTT-

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTTTACACTG
TCCTGTTTACA---