Information for 24-CTCTCTCTCTST (Motif 41)


Reverse Opposite:

p-value:1e-6
log p-value:-1.416e+01
Information Content per bp:1.690
Number of Target Sequences with motif450.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif358.7
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets78.4 +/- 43.3bp
Average Position of motif in Background75.7 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCTCTST
ANTCCTTTGTCTNNNN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTST
ACTTTCACTTTC-

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTST
TCACTTTCACTTTCN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTST
ACTTTCACTTTC-

MA0050.2_IRF1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCTCTCTST----
TTTTACTTTCACTTTCACTTT

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTST
AGTTTCAGTTTC-

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCTST-
AGCTGTCACTCACCT

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTST
CCTTTGTTTT---

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCTST-
ACCACTCTCGGTCAC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTST
RSTTTCRSTTTC-