Information for 5-AGAATGCTTCTG (Motif 5)


Reverse Opposite:

p-value:1e-75
log p-value:-1.734e+02
Information Content per bp:1.954
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets81.3 +/- 39.2bp
Average Position of motif in Background64.9 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGAATGCTTCTG
-----GCTTCC-

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAATGCTTCTG-----
-CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAATGCTTCTG-----
-TNNTGCTACTGTNNNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGAATGCTTCTG
CCWGGAATGY-----

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAATGCTTCTG--
AAAATTGTTATGAA

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAATGCTTCTG
AGGAAACAGCTG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGAATGCTTCTG
NCTGGAATGC-----

MA0164.1_Nr2e3/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAATGCTTCTG
--CAAGCTT---

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGAATGCTTCTG
CCWGGAATGY-----

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGAATGCTTCTG
GGAGAAAGGTGCGA