Information for 7-TGGATATTTGGA (Motif 7)


Reverse Opposite:

p-value:1e-70
log p-value:-1.617e+02
Information Content per bp:1.881
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.7 +/- 44.5bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGATATTTGGA--
ANNNGGATATATCCNNN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGATATTTGGA
AAGGATATNTN--

MA0042.1_FOXI1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGATATTTGGA-
-GGATGTTTGTTT

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGGATATTTGGA---
-----ATTTGCATAT

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGATATTTGGA---
-----ATTTGCATAA

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGATATTTGGA
----TATGTNTA

MA0507.1_POU2F2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGGATATTTGGA---
--TTCATTTGCATAT

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGATATTTGGA
-CCATATATGG-

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGATATTTGGA--
NNNCTGATATCTCNNNN

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGGATATTTGGA-
-------GTGGAT