Information for 17-TATGGTGARAAA (Motif 14)


Reverse Opposite:

p-value:1e-101
log p-value:-2.337e+02
Information Content per bp:1.584
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.1 +/- 56.4bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TATGGTGARAAA---
GAAAAGGTGTGAAAATT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TATGGTGARAAA
--AGGTGTGAAM

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATGGTGARAAA
--AGGTGTTAAT

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TATGGTGARAAA----
TAAGGTAATAAAATTA

MA0152.1_NFATC2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TATGGTGARAAA
-----TGGAAAA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TATGGTGARAAA
-ATGATGCAAT-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TATGGTGARAAA-
---AATGGAAAAT

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TATGGTGARAAA----
AAAGGTAATAAAATTT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TATGGTGARAAA---
-TACTGGAAAAAAAA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TATGGTGARAAA
GGAGGGGGAA---