| p-value: | 1e-97 |
| log p-value: | -2.249e+02 |
| Information Content per bp: | 1.965 |
| Number of Target Sequences with motif | 65.0 |
| Percentage of Target Sequences with motif | 0.29% |
| Number of Background Sequences with motif | 0.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 94.2 +/- 55.0bp |
| Average Position of motif in Background | 160.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 3.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0111.1_Nkx2-2/Jaspar
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --ATTTCAAGCG-----
NANTTTCAAGTGGTTAN |
|
|
|
PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 2 |
| Score: | 0.68
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATTTCAAGCG-----
AAATTCAAGTGGNTTN |
|
|
|
PH0113.1_Nkx2-4/Jaspar
| Match Rank: | 3 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATTTCAAGCG-----
AATTTCAAGTGGCTTN |
|
|
|
PH0171.1_Nkx2-1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATTTCAAGCG-----
AANTTCAAGTGGCTTN |
|
|
|
CHR(?)/Hela-CellCycle-Expression/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | ATTTCAAGCG-
-TTTGAAACCG |
|
|
|
PH0115.1_Nkx2-6/Jaspar
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATTTCAAGCG-----
AATNTTAAGTGGNTNN |
|
|
|
MA0069.1_Pax6/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATTTCAAGCG----
AANTCATGCGTGAA |
|
|
|
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --ATTTCAAGCG
CTATTTTTGG-- |
|
|
|
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---ATTTCAAGCG
KCTATTTTTRGH- |
|
|
|
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATTTCAAGCG
DTTTCCCGCC |
|
|
|
