Information for 4-AACGGGAT (Motif 16)


Reverse Opposite:

p-value:1e-74
log p-value:-1.712e+02
Information Content per bp:1.530
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets96.3 +/- 56.2bp
Average Position of motif in Background81.2 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)3.9
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AACGGGAT------
TATTATGGGATGGATAA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACGGGAT--
ANCAGGATGT

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AACGGGAT----
AANNATCCGGATGTNN

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACGGGAT-------
TTAAGGGGATTAACTAC

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACGGGAT-----
AAAAACGGATTATTG

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACGGGAT-------
TGAACCGGATTAATGAA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACGGGAT--
--NGGGATTA

MA0467.1_Crx/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACGGGAT---
AAGAGGATTAG

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACGGGAT----
NNNACCGAGAGTNNN

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACGGGAT-------
TTAGAGGGATTAACAAT