Information for 19-GGATTTSYTCAT (Motif 17)


Reverse Opposite:

p-value:1e-73
log p-value:-1.695e+02
Information Content per bp:1.532
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.4 +/- 55.8bp
Average Position of motif in Background145.5 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)3.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTSYTCAT
AAGGATATNTN---

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGATTTSYTCAT
--ATTTGCATAT

MA0101.1_REL/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGATTTSYTCAT
GGGGATTTCC----

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGATTTSYTCAT-
NNNCTGATATCTCNNNN

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGATTTSYTCAT-
AATAGGGTATCAATATT

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGATTTSYTCAT
CTACTAGGATGTNNTN--

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGATTTSYTCAT
--TTATGCAAAT

MA0107.1_RELA/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGATTTSYTCAT
GGGAATTTCC----

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGATTTSYTCAT
GGGGATTTCC----

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGATTTSYTCAT-----
NNNTTTGTTTACNTTNN