Information for 16-TATTCGGRCS (Motif 19)


Reverse Opposite:

p-value:1e-72
log p-value:-1.675e+02
Information Content per bp:1.737
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.9 +/- 55.9bp
Average Position of motif in Background113.2 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TATTCGGRCS--
ANCGCTAATTGGTCTNN

MA0083.2_SRF/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TATTCGGRCS--
TTNCCTTATTTGGNCATN

MA0125.1_Nobox/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TATTCGGRCS
TAATTGGT--

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TATTCGGRCS
CTATTTTTGG-

MA0075.1_Prrx2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TATTCGGRCS
TAATT-----

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------TATTCGGRCS
NNTNNCAATATTAG----

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TATTCGGRCS
GKTAATGR----

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TATTCGGRCS
CTAATKGV---

PH0089.1_Isx/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TATTCGGRCS-
ACTCCTAATTAGTCGT

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------TATTCGGRCS
TNNTTTCGTATTNNANN-