Information for 2-TTGAAACACTCT (Motif 2)


Reverse Opposite:

p-value:1e-408
log p-value:-9.411e+02
Information Content per bp:1.963
Number of Target Sequences with motif271.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.4 +/- 55.3bp
Average Position of motif in Background108.2 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)4.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGAAACACTCT
TTGCAACATN--

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGAAACACTCT
TGTAAACA----

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAACACTCT
TTTGAAACCG---

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGAAACACTCT-
---AAGCACTTAA

MA0087.1_Sox5/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTGAAACACTCT
---NAACAAT--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGAAACACTCT-
---AASCACTCAA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAACACTCT
AATGGAAAAT----

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGAAACACTCT-
ANANGTGATACCCTATN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTGAAACACTCT--
---AGCCACTCAAG

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTGAAACACTCT
ACTGAAACCA---