Information for 20-TTCCTTGTGTTG (Motif 20)


Reverse Opposite:

p-value:1e-61
log p-value:-1.407e+02
Information Content per bp:1.984
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.5 +/- 55.5bp
Average Position of motif in Background97.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TTCCTTGTGTTG-
------GTGTTGN

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTGTGTTG
ACTTCCTGBT----

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTGTGTTG
ACTTCCTBGT----

PB0012.1_Elf3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTTGTGTTG
TTACTTCCTNGTN---

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCCTTGTGTTG
TACTTCCTT------

MA0442.1_SOX10/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCCTTGTGTTG
--CTTTGT----

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTGTGTTG--
ANTCCTTTGTCTNNNN

MA0515.1_Sox6/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCCTTGTGTTG
-CCATTGTTTT-

MA0083.2_SRF/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTGTGTTG-----
TTNCCTTATTTGGNCATN

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCCTTGTGTTG
-CCWTTGTYYB-