Information for 21-ATCNTCACARAG (Motif 21)


Reverse Opposite:

p-value:1e-57
log p-value:-1.322e+02
Information Content per bp:1.720
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.6 +/- 54.1bp
Average Position of motif in Background116.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-2.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0442.1_SOX10/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ATCNTCACARAG
------ACAAAG

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATCNTCACARAG-
---VRRACAAWGG

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATCNTCACARAG
TAGTGATCATCATTA--

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATCNTCACARAG--
AACACCAAAACAAAGGA

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATCNTCACARAG-
-----AACAAAGG

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ATCNTCACARAG-
-----RACAAWGG

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATCNTCACARAG-----
AGAAGAACAAAGGACTA

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ATCNTCACARAG
NTTATTCGTCATNC--

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATCNTCACARAG--
TATCATAATTAAGGA

MA0479.1_FOXH1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----ATCNTCACARAG
TCCAATCCACA-----