Information for 19-GGAATGTTCR (Motif 22)


Reverse Opposite:

p-value:1e-48
log p-value:-1.111e+02
Information Content per bp:1.897
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets92.2 +/- 59.5bp
Average Position of motif in Background86.0 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)-2.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGAATGTTCR
CNGAGGAATGTG--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGAATGTTCR
CCWGGAATGY---

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGAATGTTCR
CCWGGAATGY---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGAATGTTCR
NCTGGAATGC---

MA0087.1_Sox5/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAATGTTCR
--ATTGTTA-

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAATGTTCR----
AATCAATTGTTCCGCTA

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAATGTTCR
--ATTGTT--

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAATGTTCR---
NNTTTATTGTTCTNNN

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAATGTTCR---
-GAATGTTTGTTT

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAATGTTCR----
CNNNTATTGTTCNNNNN