Information for 20-TTTTGTGGAA (Motif 23)


Reverse Opposite:

p-value:1e-43
log p-value:-9.926e+01
Information Content per bp:1.957
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif107.4
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets98.6 +/- 56.9bp
Average Position of motif in Background107.2 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTGTGGAA
TTCTNMGGAA

MA0520.1_Stat6/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTGGAA---
ANTTCTCAGGAANNN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTGTGGAA----
TCTTTCGAGGAATTTG

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTGTGGAA--
TTCTNNAGAANT

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTGGAA---
ATTTCCNGGAAATN

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTGGAA---
ANATTTTTGCAANTN

MA0102.3_CEBPA/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTGTGGAA-
NATTGTGCAAT

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTTGTGGAA-
GNATTTTTTTTTTGANC

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTGGAA-
NTTTCCNGGAAA

MA0137.3_STAT1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTGTGGAA-
TTTCCTGGAAA