Information for 25-CCGTCCCGTC (Motif 25)


Reverse Opposite:

p-value:1e-19
log p-value:-4.510e+01
Information Content per bp:1.849
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.8 +/- 52.5bp
Average Position of motif in Background75.1 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCCGTC--
ATCCCCGCCCCTAAAA

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCCGTC---
GGTCCCGCCCCCTTCTC

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCGTCCCGTC--
TCACCCCGCCCCAAATT

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGTCCCGTC---
TCCGCCCCCGCATT

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCCGTC--
GCCCCGCCCCCTCCC

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGTCCCGTC
GGCCCCGCCCCC--

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCGTCCCGTC--
CGGTGACGTCAC

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGTCCCGTC------
TACGCCCCGCCACTCTG

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCGTCCCGTC-
CCCCCGCCCCCGCC

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGTCCCGTC
-CTTCCGGT-