Information for 25-ATCATCGAATGG (Motif 29)


Reverse Opposite:

p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.530
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.9 +/- 56.8bp
Average Position of motif in Background144.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)3.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGAATGG----
TATTATGGGATGGATAA

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------ATCATCGAATGG
AAGGCGAAATCATCGCA---

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATCATCGAATGG
NANTTCATTGAATTA

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATCATCGAATGG-
ACTATGAATGAATGAT

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCGAATGG---
NNNTATTGAATTGNNN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATCATCGAATGG
GTCATN------

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ATCATCGAATGG
NNNATTCCTCGAAAGN

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGAATGG---
AAAACATCGTTTTTAAG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ATCATCGAATGG
--NCTGGAATGC

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ATCATCGAATGG-----
-----TGATTGGCTANN