Information for 23-AACCCSGY (Motif 30)


Reverse Opposite:

p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.632
Number of Target Sequences with motif5222.0
Percentage of Target Sequences with motif23.47%
Number of Background Sequences with motif6099.3
Percentage of Background Sequences with motif21.88%
Average Position of motif in Targets100.1 +/- 56.1bp
Average Position of motif in Background100.2 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCCSGY
AAATCACTGC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AACCCSGY---
NNNNTGACCCGGCGCG

MA0483.1_Gfi1b/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACCCSGY-
AAATCACAGCA

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AACCCSGY---
NNCNTGACCCCGCTCT

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AACCCSGY------
CTATCCCCGCCCTATT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACCCSGY
-TCCCCA-

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AACCCSGY---
ACCACTCTCGGTCAC

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACCCSGY
ACAACAC---

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AACCCSGY
CAAATCACTG-

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AACCCSGY------
CCACACAGCAGGAGA