Information for 5-ATTCCCAGTAAC (Motif 4)


Reverse Opposite:

p-value:1e-346
log p-value:-7.976e+02
Information Content per bp:1.778
Number of Target Sequences with motif251.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets98.7 +/- 55.9bp
Average Position of motif in Background152.9 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0144.2_STAT3/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTCCCAGTAAC
TTTCCCAGAAN-

MA0520.1_Stat6/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTCCCAGTAAC--
ANTTCTCAGGAANNN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCCCAGTAAC
ATTTCCAAGAA--

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTCCCAGTAAC
NTTTCTNAGAAA-

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTCCCAGTAAC
AGTATTCTCGGTTGC

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTCCCAGTAAC
HTTTCCCASG---

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTCCCAGTAAC
TTTCCTGGAAA-

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTCCCAGTAAC
-TTCTNMGGAA-

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTCCCAGTAAC--
ATTTCCCAGVAKSCY

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTCCCAGTAAC-
-TTCTNNAGAANT