Information for 9-TTGTGATGTGTG (Motif 7)


Reverse Opposite:

p-value:1e-251
log p-value:-5.795e+02
Information Content per bp:1.796
Number of Target Sequences with motif237.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets92.4 +/- 53.6bp
Average Position of motif in Background116.6 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGATGTGTG-
NNNNNATTGATGNGTGN

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGTGATGTGTG------
-NNTNNTGTCTGGNNTNG

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGTGATGTGTG-----
-NNNNTTGTGTGCTTNN

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGTGATGTGTG-----
-NNGCGTGTGTGCNGCN

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGATGTGTG-
NNATNTGATANNNNN

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TTGTGATGTGTG
GTNTTGTTGTGANNT---

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTGTGATGTGTG---
-----AGGTGTGAAM

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTGTGATGTGTG---
---GGATGTTTGTTT

MA0594.1_Hoxa9/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTGTGATGTGTG--
---TGATTTATGGC

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGATGTGTG
TNCCTTTGATCTTN-