Information for 1-GCTCTGWG (Motif 1)


Reverse Opposite:

p-value:1e-120
log p-value:-2.773e+02
Information Content per bp:1.686
Number of Target Sequences with motif14103.0
Percentage of Target Sequences with motif50.49%
Number of Background Sequences with motif11968.3
Percentage of Background Sequences with motif43.52%
Average Position of motif in Targets109.7 +/- 60.5bp
Average Position of motif in Background108.8 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGWG
NGCTN----

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTCTGWG
GCTCCG--

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGWG------
TGCCCTGAGGCANTN

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGWG----
NTGCCCTAGGGCAA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTCTGWG--
ATGCCCTGAGGC

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGWG------
TGCCCTGGGGCNANN

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTCTGWG
GCTGTG--

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGWG----
NNGCNCTGCGCGGC

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGWG----
NTGCCCTTGGGCGN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGWG---
TCCCCTGGGGAC