Information for 9-CCCTTTACCG (Motif 11)


Reverse Opposite:

p-value:1e-46
log p-value:-1.066e+02
Information Content per bp:1.649
Number of Target Sequences with motif4730.0
Percentage of Target Sequences with motif16.93%
Number of Background Sequences with motif3816.5
Percentage of Background Sequences with motif13.88%
Average Position of motif in Targets108.6 +/- 61.0bp
Average Position of motif in Background110.8 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTACCG
TGACCTTGACCT

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTACCG
TGACCTTTNCNT

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTACCG------
TCNCTTTACAGCGNNNT

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTACCG--
TGACCTTTGCCCTA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTACCG---
TGACCTTTGCCCTAN

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTACCG--
TGACCTTTGCCCCA

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTTTACCG
NNGCACCTTTCTCC-

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCTTTACCG--
CCTTTTATAGNC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCTTTACCG---
-VDTTTCCCGCCA

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTACCG---
GAGCCCTTGTCCCTAA