Information for 11-WTYMGTCS (Motif 12)


Reverse Opposite:

p-value:1e-44
log p-value:-1.013e+02
Information Content per bp:1.399
Number of Target Sequences with motif5443.0
Percentage of Target Sequences with motif19.49%
Number of Background Sequences with motif4487.2
Percentage of Background Sequences with motif16.32%
Average Position of motif in Targets106.9 +/- 61.0bp
Average Position of motif in Background107.1 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WTYMGTCS-
CTTCCGGNNN

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-WTYMGTCS
AATTAG---

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:WTYMGTCS--
TTAAGTGCTT

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----WTYMGTCS-----
NTNNTTAAGTGGTTANN

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----WTYMGTCS
RGCCATYAATCA

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--WTYMGTCS----
TTATTAGTACATAN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----WTYMGTCS-----
NTNNTTAAGTGGNTNAN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---WTYMGTCS
NRYTTCCGGY-

MA0124.1_NKX3-1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WTYMGTCS
-TAAGTAT

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WTYMGTCS-
TTAAGTGGA