Information for 14-TTTCCGGAGC (Motif 17)


Reverse Opposite:

p-value:1e-36
log p-value:-8.294e+01
Information Content per bp:1.647
Number of Target Sequences with motif6424.0
Percentage of Target Sequences with motif23.00%
Number of Background Sequences with motif5480.1
Percentage of Background Sequences with motif19.93%
Average Position of motif in Targets108.6 +/- 62.0bp
Average Position of motif in Background110.7 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCCGGAGC
CTTCCGGNNN

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TTTCCGGAGC
----CGGAGC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGGAGC
NRYTTCCGGY--

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGGAGC
HACTTCCGGY--

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGGAGC
NRYTTCCGGH--

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTCCGGAGC
CTTCCGGT--

MA0076.2_ELK4/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTCCGGAGC
CCACTTCCGGC--

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGGAGC
NCCACTTCCGG---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTCCGGAGC
ATTTCCTGTN-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGGAGC
ATTTCCTGTN-