Information for 16-GTGTTTACGA (Motif 19)


Reverse Opposite:

p-value:1e-32
log p-value:-7.436e+01
Information Content per bp:1.539
Number of Target Sequences with motif1214.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif837.4
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets107.4 +/- 59.0bp
Average Position of motif in Background110.1 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0031.1_FOXD1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTGTTTACGA
ATGTTTAC--

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GTGTTTACGA
NYYTGTTTACHN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTGTTTACGA
CTGTTTAC--

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GTGTTTACGA-----
GNNNTTTTACGACCTNA

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GTGTTTACGA-----
NNNATTTTACGACNNTN

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GTGTTTACGA-----
ANNATTTTACGACNTNA

MA0030.1_FOXF2/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTACGA---
NTTGTTTACGTTNN

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTACGA-----
ANNTTTTACGACNTNN

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTTACGA-----
ANATTTTACGAGNNNN

MA0157.1_FOXO3/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTGTTTACGA
-TGTTTACA-