Information for 18-TTACTGCG (Motif 20)


Reverse Opposite:

p-value:1e-28
log p-value:-6.525e+01
Information Content per bp:1.957
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif128.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets111.5 +/- 62.2bp
Average Position of motif in Background108.3 +/- 73.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTGCG----
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTACTGCG----
TCNNTTTACAGCGNNNT

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTACTGCG-
-TACTNNNN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTACTGCG
CACTTCCTGT-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTACTGCG
ATTTCCTGTN

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTACTGCG
CCACTTCCTGT-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTACTGCG
ATTTCCTGTN

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTACTGCG
--GCTGTG

MA0475.1_FLI1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTACTGCG
CCACTTCCTGT-

MA0158.1_HOXA5/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTACTGCG
AATTAGTG--