Information for 12-ATCGGGGCCTCG (Motif 23)


Reverse Opposite:

p-value:1e-24
log p-value:-5.593e+01
Information Content per bp:1.701
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets112.4 +/- 61.6bp
Average Position of motif in Background47.5 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ATCGGGGCCTCG
----AGGCCTAG

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATCGGGGCCTCG
GGGGCCGAGGCCTG-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATCGGGGCCTCG
--CNAGGCCT--

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATCGGGGCCTCG
GGGGGCGGGGCC---

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATCGGGGCCTCG
TGCGCATAGGGGAGGAG

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATCGGGGCCTCG---
AGCTCGGCGCCAAAAGC

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATCGGGGCCTCG
--CGGAGC----

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ATCGGGGCCTCG-
NNNATTGGGGGTNTCCT

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATCGGGGCCTCG--
----TGACCTTGAN

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ATCGGGGCCTCG--
AGAGCGGGGTCAAGTA