Information for 13-AGGAAGTGTGTT (Motif 24)


Reverse Opposite:

p-value:1e-24
log p-value:-5.577e+01
Information Content per bp:1.592
Number of Target Sequences with motif984.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif689.9
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets108.9 +/- 60.7bp
Average Position of motif in Background113.5 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGTGTGTT
AGAGGAAGTG----

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGTGTGTT
ACAGGAAGTG----

MA0473.1_ELF1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----AGGAAGTGTGTT
GAACCAGGAAGTG----

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGGAAGTGTGTT
CAGGAAGG-----

MA0474.1_Erg/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGTGTGTT
ACAGGAAGTGG---

MA0080.3_Spi1/Jaspar

Match Rank:6
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------AGGAAGTGTGTT
AAAAAGAGGAAGTGA---

MA0475.1_FLI1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGTGTGTT
ACAGGAAGTGG---

MA0098.2_Ets1/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAAGTGTGTT
NNNACAGGAAGTGGN--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGAAGTGTGTT
ACAGGAAGTG----

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGAAGTGTGTT
CAGGAAAT-----