Information for 14-AAGGTTGTAAAC (Motif 25)


Reverse Opposite:

p-value:1e-22
log p-value:-5.125e+01
Information Content per bp:1.702
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.7 +/- 50.4bp
Average Position of motif in Background183.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC---
TAAAGTCGTAAAATAG

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AAGGTTGTAAAC-
-----TGTAAACA

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC----
TTAGGTCGTAAAATTTC

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC---
TAAAGTCGTAAAACAT

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC----
CAAGGTCGTAAAATCTT

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC----
TAAGGTCGTAAAATCCT

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTGTAAAC---
TAAAGTCGTAAAACGT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAGGTTGTAAAC----
----NDGTAAACARRN

MA0164.1_Nr2e3/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGGTTGTAAAC
AAGCTTG-----

MA0031.1_FOXD1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AAGGTTGTAAAC--
------GTAAACAT