Information for 15-SAGGCCCGGGCC (Motif 27)


Reverse Opposite:

p-value:1e-20
log p-value:-4.612e+01
Information Content per bp:1.648
Number of Target Sequences with motif1577.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif1225.9
Percentage of Background Sequences with motif4.46%
Average Position of motif in Targets107.0 +/- 62.4bp
Average Position of motif in Background104.4 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:SAGGCCCGGGCC--
CAGGCCNNGGCCNN

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-SAGGCCCGGGCC-
ACATGCCCGGGCAT

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SAGGCCCGGGCC
-AGGCCTAG---

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SAGGCCCGGGCC
GGGGGCGGGGCC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:SAGGCCCGGGCC
-AGGCCTNG---

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--SAGGCCCGGGCC-
CATGGCCCCAGGGCA

MA0003.2_TFAP2A/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--SAGGCCCGGGCC-
CATTGCCTCAGGGCA

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--SAGGCCCGGGCC--
NNAGGGGCGGGGTNNA

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SAGGCCCGGGCC-
-AGGTCAAGGTCA

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SAGGCCCGGGCC
-TGGGTGGGGC-