Information for 2-AACGGTCC (Motif 3)


Reverse Opposite:

p-value:1e-112
log p-value:-2.596e+02
Information Content per bp:1.587
Number of Target Sequences with motif15599.0
Percentage of Target Sequences with motif55.84%
Number of Background Sequences with motif13498.4
Percentage of Background Sequences with motif49.09%
Average Position of motif in Targets109.6 +/- 60.2bp
Average Position of motif in Background108.6 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AACGGTCC
NHAACBGYYV

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGTCC----
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----AACGGTCC----
NNNNTAACGGTTNNNAN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AACGGTCC
YAACBGCC-

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AACGGTCC
CCAACTGCCA

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AACGGTCC--
GGAGAAAGGTGCGA

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AACGGTCC----
TCTCAAAGGTCACGAG

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AACGGTCC
ANGNAAAGGTCA

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AACGGTCC----
TCTCAAAGGTCACCTG

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AACGGTCC
AACCGANA