Information for 20-AGAMAGCTGGGC (Motif 30)


Reverse Opposite:

p-value:1e-17
log p-value:-4.064e+01
Information Content per bp:1.801
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.5 +/- 68.8bp
Average Position of motif in Background154.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0500.1_Myog/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAMAGCTGGGC
-GACAGCTGCAG

MA0521.1_Tcf12/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAMAGCTGGGC
-AACAGCTGCAG

MA0100.2_Myb/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGAMAGCTGGGC
TGGCAGTTGN--

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAMAGCTGGGC
-AACAGCTG---

MA0499.1_Myod1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAMAGCTGGGC
NGNGACAGCTGCN-

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGAMAGCTGGGC
GATATTGACAGCTGCGT

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGAMAGCTGGGC-
NNNTGGCAGTTGGTNN

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAMAGCTGGGC-
CACGGCAGTTGGTNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAMAGCTGGGC
TGGCAGTTGG--

MA0498.1_Meis1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGAMAGCTGGGC
NNNTGAGTGACAGCT----